ENCODE Toolkit

io.github.ammawlav0.3.0-beta.5Updated Sep 24, 2026

20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines

VerifiedSTDIODesktop onlyWeb Search & Scraping

Installation

In SourceWeft

  1. Open ENCODE Toolkit in the dashboard and add it to a workspace.
  2. Enable the server for the chats that should use its tools.

Desktop only via STDIO. STDIO servers start a local process, so they need the SourceWeft desktop host.

Other MCP clients

Follow the launch instructions in the repository.

Tools

0
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Version history

1
  1. v0.3.0-beta.5LatestSep 16, 2026