Config Gc

by affaan-mef648e01899bNo license275K starsListed Oct 8, 2026Updated Oct 8, 2026Repository updated 3 days ago

Garbage collection for your Claude Code configuration. Periodically scans ~/.claude (skills, memory, hooks, permissions, MCP servers, caches) for redundant, stale, orphaned, or low-value items, then walks the user through a confirm-each-deletion cleanup. Use when the user says "clean up my config", "config GC", "too many skills", "audit my setup", "my .claude is bloated", or asks for a periodic config review.

AI-generated overview

Audits a Claude Code configuration under ~/.claude and walks the user through confirm-each-deletion cleanup of stale items.

What it does
Scans eight configuration channels under ~/.claude — skills, memory files, hooks, permission entries, MCP servers, scheduled jobs, project history and runtime caches — and collects candidates that look redundant, orphaned, expired or low-value. It ranks candidates by confidence, presents them as a numbered table, and asks for a separate y/n/skip decision on each one. Confirmed items are soft-deleted by renaming to .disabled or moving to ~/.claude/_gc_trash/ /, and every run is appended to ~/.claude/gc_log.md with undo instructions, followed by a report of reclaimed size and a suggested next review date.
When to use it
Use when the user asks to clean up, audit or slim down their Claude Code configuration, complains about too many skills, noisy hooks or slow session startup, or when a periodic config review is due. It is also meant to run after installing a large skill pack to reconcile overlaps with an existing setup. It is not for cleaning project source code, clearing chat history or uninstalling Claude Code.
Requirements
Instructions only; no bundled scripts. It expects a Claude Code configuration under ~/.claude and uses shell tools such as jq, grep, find, du and mv, plus read/write access to settings.json, settings.local.json and gc_log.md. It never deletes autonomously and requires per-item user confirmation.

Config GC — Garbage Collection for Claude Code Setups

Borrowed from runtime garbage collection: periodically scan for objects that are no longer referenced, redundant, expired, or low-value, and reclaim the space. The critical difference: here, collection requires a human in the loop. Never delete autonomously.

When to Activate

  • The user asks to clean up, audit, or slim down their Claude Code configuration
  • The user complains about too many skills, noisy hooks, or slow session startup
  • A monthly/periodic config review is due
  • After installing a large skill pack (e.g. this repo), to reconcile overlaps with existing setup

Do NOT activate for: cleaning project source code (that's refactoring), clearing chat history, or uninstalling Claude Code itself.

Design Philosophy

  1. Append-only configs leak. Skills, memory files, hooks, and permission entries only ever get added. Without periodic review they rot silently.
  2. Regular audits beat one-time purges. Scan every ~30 days, propose a small batch of candidates each time.
  3. Per-channel strategies. Each accumulation type (skills, hooks, permissions, ...) has its own staleness signals — don't apply one rule everywhere.
  4. Soft-delete first. Rename to .disabled > move to ~/.claude/_gc_trash/ > real deletion. Always keep an undo path.
  5. Forced human-in-the-loop. Every candidate gets its own [y/n/skip] confirmation. No "yes to all" shortcut.
  6. Keep a log. Every GC run appends to ~/.claude/gc_log.md: what was touched, why, and how to undo it.

Scan Channels

#ChannelPathStaleness / redundancy signals
1Skills~/.claude/skills/*/Heavily overlapping names; never triggered in recent transcripts; domain mismatch with the user's actual work; broken or empty SKILL.md
2Memory~/.claude/**/memory/*.md + its indexMultiple index entries for one topic; contents contradicting newer entries; dates that have passed; orphan files missing from the index; sub-100-word fragments that should merge
3Hooks~/.claude/hooks/ + settingsScripts present on disk but referenced by no hook config; old versions superseded by rewrites
4Permissionspermissions.allow in settings.json / settings.local.jsonDuplicate entries; specific entries already covered by a wildcard (e.g. Bash(git push) when Bash(*) is allowed); one-off grants from past experiments
5MCP servers~/.claude.json or project .mcp.jsonServers that fail to connect; functional duplicates; long-unused
6Scheduled reminders / jobswherever the user keeps themFired one-shots older than 30 days; jobs whose target scripts no longer exist
7Project history~/.claude/projects/*/Stale handoff snapshots; session records superseded by newer state
8Runtime cachescache/, file-history/, logs/, shell-snapshots/Sort by size and mtime; propose items >30 days old and large

Workflow

  1. Scan all channels (or the subset the user names). Collect candidates with: path, channel, signal that flagged it, size, last-modified.
  2. Rank by confidence (broken/orphaned = high; merely old = low) and present as a numbered table. Cap each run at ~20 candidates — GC is periodic, not exhaustive.
  3. Confirm one by one. For each candidate show the evidence, then ask [y/n/skip]. The user can stop at any point.
  4. Soft-delete confirmed items: prefer .disabled rename for skills/hooks and _gc_trash/<date>/ move for files. Permission entries live in JSON (no comments possible): back up the settings file, record each removed entry verbatim in gc_log.md, then remove it from the allow array with jq. Only hard-delete when the user explicitly asks.
  5. Log the run to ~/.claude/gc_log.md: timestamp, items actioned, undo instructions.
  6. Report: reclaimed size, channels still healthy, suggested next review date.

Example Scan Commands

Orphaned hook scripts (channel 3) — scripts on disk that no hook config references:

bash
for f in ~/.claude/hooks/*; do  name=$(basename "$f")  grep -rq "$name" ~/.claude/settings.json ~/.claude/settings.local.json 2>/dev/null \    || echo "ORPHAN: $f"done

Redundant permission entries (channel 4) — duplicates, and specific grants shadowed by a wildcard:

bash
jq -r '.permissions.allow[]' ~/.claude/settings.local.json | sort | uniq -dif jq -e '.permissions.allow | index("Bash(*)")' ~/.claude/settings.local.json >/dev/null; then  jq -r '.permissions.allow[]' ~/.claude/settings.local.json \    | grep '^Bash(' | grep -vF 'Bash(*)'fi

Largest stale caches (channel 8) — du -k instead of GNU-only find -printf, so it works on macOS/BSD too:

bash
find ~/.claude/file-history ~/.claude/shell-snapshots -type f -mtime +30 \  -exec du -k {} + 2>/dev/null | sort -rn | head -20

Soft-delete with undo path (capture the date once so the log can't disagree with the directory):

bash
gc_date=$(date +%Y-%m-%d)mkdir -p ~/.claude/_gc_trash/$gc_datemv ~/.claude/skills/dead-skill ~/.claude/_gc_trash/$gc_date/echo "$(date -Iseconds) moved skills/dead-skill -> _gc_trash/$gc_date/ (undo: mv back)" >> ~/.claude/gc_log.md

Removing a confirmed-redundant permission entry (JSON has no comments — back up, log, then edit):

bash
cp ~/.claude/settings.local.json ~/.claude/settings.local.json.bakecho "$(date -Iseconds) removed permission entry: Bash(git push) (undo: restore from .bak or re-add)" >> ~/.claude/gc_log.mdjq '.permissions.allow -= ["Bash(git push)"]' ~/.claude/settings.local.json.bak \  > ~/.claude/settings.local.json

Anti-Patterns

  • Bulk approval. Asking "delete all 15? [y/n]" defeats the design. One item, one decision.
  • Hard-deleting on first pass. If there's no _gc_trash/ copy or .disabled rename, you did it wrong.
  • Treating "old" as "dead". A skill untouched for 60 days may be seasonal (tax season, quarterly reviews). Age is a signal, not a verdict — that's why a human confirms.
  • Cleaning memory by truncation. Merging two contradicting memory files requires reading both and keeping the newer truth, not deleting the longer one.
  • Touching anything outside ~/.claude (or the project's .claude/). Config GC never wanders into source trees.

Best Practices

  • Run after big additions, not just on a calendar: installing a 50-skill pack is exactly when overlap with existing skills appears.
  • When two skills overlap, prefer disabling the one with the weaker trigger description — it's the one that was probably never firing anyway.
  • Permission cleanup is the highest-value channel per minute spent: redundant allow-entries make security review harder.
  • Keep gc_log.md forever. It's tiny, and "when did I disable that hook and why" comes up more often than you'd think.

Related Skills

  • skill-stocktake — audits skill quality; config-gc audits skill existence. Run stocktake on what survives GC.
  • workspace-surface-audit — the additive counterpart: recommends what to install. config-gc is the subtractive half of the same lifecycle.
  • configure-ecc — after installing skills with it, run config-gc to reconcile overlaps with your pre-existing setup.
  • continuous-learning — produces the memory files this skill later audits.
  • security-review — pairs well with the permissions channel.

Source and attribution

Source:affaan-m/eccinskills/config-gcat commitef648e0

License: No license

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